| Pos. | No. | Name | Type | Time | Delay | Gap | Lap | Team | ||||
| 1 | 12 | Yukiji Takeuchi | YZF-R1 | 1'59.992 | 144.05km/h | 7/7 | Reality RACING | |||||
| 2 | 5 | Tadashi Oko | YZF-R1 | 2'01.348 | 1.356 | 1.356 | 4/9 | Lean with RT | ||||
| 3 | 40 | Masanori Hiruta | GSX-R1000 | 2'01.739 | 1.747 | 0.391 | 5/7 | TISSOT EVES RT Nakamura Engine | ||||
| 4 | 43 | Mashiro Shinji | ZX-10R | 2'01.909 | 1.917 | 0.170 | 2/4 | StarworkS★Racing+team Yurufuwa | ||||
| 5 | * | 25 | Yusuke Kakuta | GSX-R1000 | 2'02.901 | 2.909 | 0.992 | 8/8 | Ts Riders NEXT DESIGN | |||
| 6 | 18 | Hoshino Theory | S1000RR | 2'02.962 | 2.970 | 0.061 | 3/7 | Motolatte Takasaki 8810R | ||||
| 7 | 14 | Haruichi Kubota | GSX-R1000 | 2'04.545 | 4.553 | 1.583 | 8/9 | NR Project Garage 5 | ||||
| 8 | 52 | Ono Kimihisa | ZX-10R | 2'04.579 | 4.587 | 0.034 | 8/9 | Garage Fujita | ||||
| 9 | 11 | Masanori Yano | CBR1000RR | 2'04.709 | 4.717 | 0.130 | 5/6 | Dream House | ||||
| 10 | 84 | Katsunori Ichikawa | ZX-10R | 2'05.095 | 5.103 | 0.386 | 8/9 | Team BEE | ||||
| 11 | 71 | Toshiyasu Takano | YZF-R1 | 2'05.245 | 5.253 | 0.150 | 7/9 | PRT TOPS | ||||
| 12 | 33 | Takayuki Honma | YZF-R1 | 2'05.297 | 5.305 | 0.052 | 8/8 | Autoshop Honma and Friends | ||||
| 13 | 24 | Yuichi Shibana | GSX-R1000R | 2'05.763 | 5.771 | 0.466 | 3/5 | Seiwa Automobile Leen with Akiyama Industries | ||||
| 14 | 47 | Hiroji Hori | GSX-R1000 | 2'10.749 | 10.757 | 4.986 | 2/9 | Lyrica AMENA | ||||
| Vehicles that have passed the qualifying round: | ||||||||||||
| 35 | Shanley John | S1000RR | Did not participate | Team Shamrock | ||||||||